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Home » Grow » Growing Vegetables » How to Save Tomato Seeds by Fermenting

How to Save Tomato Seeds by Fermenting

May contain affiliate links or sponsored content. Please see my privacy policy and affiliate disclosure.

Originally published on September 29, 2016. Last updated on September 27, 2023

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Two bowls of fresh tomatoes and dried fermented tomato seeds on a plate.

In many instances, saving seeds is pretty easy. Cut open a butternut squash, scoop out the seeds, put a few on a paper towel to dry, and there you go. With some veggies, like zucchini and cucumbers, you need to let a few get pretty big – bigger than you’d want to eat, so that the seeds fully develop before saving. Saving tomato seeds is a little bit trickier, but isn’t really that hard once you know what to do. Since tomatoes are one of the most popular veggies to grow, I thought I’d show you how to save tomato seeds by fermenting so that you don’t have to buy any next year!

A woman squeezing seeds out of a fresh tomato into a small glass bowl.

Why Save Your Own Seeds?

The main benefit to saving your own seeds of any kind is that you can select for certain qualities.

Many of our Roma tomatoes got blossom end rot, but there were some that didn’t. Here are some great tips on growing Roma tomatoes that I will be following next time I grow them.

I’m going to save the seeds of the best tomatoes from the plants that didn’t seem to be affected to see if that makes a difference next year. If you want big tomatoes, save seeds from your biggest tomatoes!

Of course, saving your own seeds is also great for for food security and cost cutting. I always feel better when I know that I have a good amount of homegrown seeds saved up.

It’s also helpful to know how to save many different types of vegetable seed. This Seed Saving 101 post is a great resource for that!

Today I will be saving seed from some super sweet orange cherry tomatoes (they may be Sun Gold’s, but I can’t remember) and the Roma’s.

We saved seeds from these same varieties last year, and these were grown from those seeds.

sungold and san marzano tomatoes from the garden

How to Ferment Tomato Seeds for Saving

I’ll start by saying that you can just squeeze out the tomato seeds and dry them for saving, but you may not get a very good germination rate by using that method.

What tomato seeds really need is a bit of fermentation in order to remove the substance that coats the seeds and inhibits germination. It also might help to kill any diseases that are passed through the seeds.

tomatoes cut in half on a plate

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Even if you’re not trying to select for some specific trait, do make sure to choose high quality tomatoes for seed saving.

Cut the tomatoes in half and squeeze out the seeds and as much of the juice as you can along with them. Be sure to separate different tomato varieties into different bowls so that you know what’s what.

squeezing out tomato seeds into a bowl

Once you’ve squeezed out several tomatoes, you should have a good amount of seeds and liquid in your bowl.

tomato seeds in a bowl to ferment for saving

Cover the bowls with cheesecloth and a rubber band to keep bugs out, and set out of the way in a warm spot out of direct sunlight for several days.

cover bowls of tomato seeds with cheesecloth

Wait at least three days, but up to a week is fine.

There might be a layer of scum or mold on top, that is totally ok and will not hurt the seeds at all. Just scrape it off and strain out the seeds from the liquid, then give them a quick rinse.

Put them on a paper towel to absorb some of the water, then transfer them to a plate to fully dry.

dried tomato seeds on a plate for saving

Once the seeds are totally dry you can store them in a small glass jar, a zip top baggie, or these handy printable seed packets.

Make sure you label them so that you know what they are when next spring comes around.

Trust me on the label part, I’ve made that mistake before! (Hmm, I wonder what these seeds are? Let’s plant some and see).

Saving tomato seeds is as easy as that!

Here are some other great seed saving resources:

  • How to Save Kale Seed from Homestead Lady
  • Saving Seeds from Cucumbers will Save you Money from Joybilee Farm
  • How to Grow Squash Seeds from Joybilee Farm
  • How to Save Bean Seeds from Grow a Good Life
  • How to Grow Potatoes from “Seed” (my post)

Have you ever saved seeds before? What are your favorite seeds to save?Save

Ways to use your tomato harvest:

  • Homemade Tomato Soup with Fresh Tomatoes
  • Refrigerator Pickled Green Tomatoes
  • Roasted Cherry Tomato Sauce: Quick and Easy Recipe for Summer
  • Fermented Cherry Tomatoes
  • Fermented Green Tomatoes: preserving the harvest
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Reader Interactions

Comments

  1. Joanne Bushman says

    November 8, 2021 at 3:42 pm

    I cut open a tomato that I bought at a supermarket & found that it was full of sprouted “seedlings.” Do you know of a way to hold a few of those over the winter so I can plant them in the spring? I didn’t check to see if there were any unsprouted seeds.

    Reply
  2. Sarah Johnson says

    August 25, 2019 at 10:36 am

    Thank you! I just set some seeds from our Oxheart Orange into a glass container on our porch. Should be ready and dry within the week. Thanks for the information. Cheers

    Reply
  3. SUDHIR KUMAR GUPTA says

    July 31, 2019 at 4:32 am

    It will help me a lot to have my own tomato seeds for the next season. thanks once again

    Reply
  4. Benny says

    January 27, 2019 at 11:08 am

    great I just started also collecting the sweetest and biggest orange that I have yesterday:) now the nest one is these tomatoes :)

    Reply
  5. seminte de rosii says

    October 6, 2018 at 1:11 am

    I use this method for many years because it is a fact that fermenting the seeds improves germination

    Reply

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Hello there! I’m Colleen.

I want to inspire you to live seasonally, become more self sufficient, and protect your health. I share information on foraging and wildcrafting, fermenting and preserving, cooking whole foods from scratch, permaculture gardening, and making herbal products. And that’s just the beginning! Learn more.

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